/images/avatar.png

Xiaopeng Xu, Ph.D.

Research Scientist @ KAUST · Agentic AI for scientific discovery, protein design & synthetic biology

Recent News

  • Sep 23, 2026, my Co-I Shaheen III Grand Challenge Project proposal on “Multi-Scale AI-MD-QM/MM Platform for Next-Generation Biologics Design” was appproved on Shaheen III GPU! Cheers!
  • Aug 2, 2026, my Co-I Translational Research Grants (TRG2026) on AI-based protein design solutions for industrial biologics and medical applications was funded by KAUST! ~1 million USD fund to support our research! Cheers!
  • Jun 23, 2026, started as a Research Scientist at SFB@KAUST.
  • Jun 8, 2026, Mater-trends — to track researches on material science — up and alive.
  • Jun 3, 2026, AI-trends — to track research trends on artificial intelligence — and Bio-trends — to track researches on bioscience — up and alive.
  • Mar 25, 2026, the first tool buddle in MacromNex, ProteinMCP — an agentic AI framework for autonomous protein engineering, published in Protein Science!
  • Mar 24, 2026, SegDesign — a framework for protein segment engineering — published in Protein Science.
  • Jan 22, 2025, AggNet — a Deep Learning method for protein aggregation prediction — published in Protein Science.
  • Oct 3, 2024, AutoBA — for multi-omics analysis with Agentic AI — published in Advanced Science.
  • Jul 18, 2024, SANTO — a method for alignment and stitching in spatial omics — published in Nature Communications.
  • Jun 12, 2024, HELM-GPT — de novo macrocyclic peptide design — published in Bioinformatics!
  • Jun 23, 2024, started as a Postdoctorate Research Fellow at SFB@KAUST.
  • May 13, 2024, my Co-I Shaheen III proposal on “Molecular dynamics simulations-enhanced AI for enzyme design and optimization” was appproved on Shaheen III CPU! Cheers!
  • May 5, 2024, defended my Ph.D Dissertation — “A ChatGPT-like solution for protein design: combining generative and predictive AI to design functional proteins”! Cheers!
  • Jun 28, 2023, SGPT-RL — for chemical drug design with GPT and RL — published in F1000Research!
  • Feb 20, 2023, AB-Gen — for antibody with GPT and RL — published in Genomics, Proteomics & Bioinformatics!
  • Nov 11, 2021, an AI guided review of 17 000 studies in COVID-19 computational research published in Briefings in Bioinformatics

Recent Notes

Conda 常用命令

简介

通常在项目开发中,不同项目有不同的环境要求,配置这些环境会花大量的时间。Conda就是为了解决这一问题而生。其他解决方案还有 docker,虚拟化程度更高,但使用成本也会提升。